Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816773.1_cds_XP_016498955.1_12927
CDS Infomation

[gene=LOC107817612] [db_xref=GeneID:107817612] [protein=protein FAM188A-like] [protein_id=XP_016498955.1] [location=join(11518..11969,14259..14337,15347..15498,16081..16204,16774..16959,17248..17319,17441..18259)] [gbkey=CDS]
Sequence

ATGGCGGATCAAGAAGATGAAGAGTTGAAAATGGCGTTAAGGATGAGTATGCAGAAGGAA
TCACCGGAGCCAAAGAGGAGCAAACCGGGAGAGGAGGTCGTCGGTGCCGTTGGGGAAGAA
GGGGAGTCGCCGGAGGTGAAAAACCGGCGACTGCAGAGGGAATTGATGGCTGCTGCTGCT
GAAAAGCGGATGATAGTGGCGGCCAAGAATGTGGCGGAGCCGCTGGCGGAAAAGAGTGGT
AGGTCTGGTAGTGGGGTGGTGGAATGTAAGGATAAAAGTGTGAATTTGGTGAAGGATGAG
GATAAAAATGTGAATTTGGTGAAGGGTGAGGAGAAAATTGTGAACTTGGGGGAAGAGCTT
TCAGTTGCAGAGGCTAATGAGTTGTTTTCAATGATCTTTGGTTGTGAAGTTACCAGAGAT
ATTCTTGGTCAGTGGACTAATCAGGGCATAAGGTTTAGTCCTGATCCAGATACATCAATG
GGCTTAGTGCAGCATGAAGGTGGGCCCTGTGGTGTGCTAGCAGCAATACAGGCTTTTGTT
CTGAAATACTTATTGTTTTTCCCGGAGGAATTAAATATTGTTTCACCTAGCTTGTCCGCC
AATGTGGGTTTGAGAAGATTGGCTGACAAAGAATCTGCTGGAGCTGATATTTTTTCATCT
CTAAGTGAAGAGAAAAAATCAAGAGCATTGGTCAGAGGCATGGGTGAGATATTGTTTATG
TGCGGAAGCAATAGAAGGGTTGTGATAGCATCTTTGAGAATACTTGATGGTAACCTTGAG
GAGTCTGAGGGGCGTTCGAGTGATGAGGTCATTTCTAAAGCACTTGAAGGTCTCTCACTT
GAATCCGGGGCTAACTTGCAAAAGGTTTTAATCATTAACACATATACATCATCAATAGAT
GCTCTTCAAAGGCTTGAAGCACTGCTCCCTGTATTCCGAAGTCGTATGGGAGCAATGCTG
TTCCTAATATCAGCTCTGCTTTCTCGTGGAATGGACTCTGTTCAAGCTGATAGGGATGAT
CCTTCTCAACCTTTGGTTACAGCACCTTTTGGACATGCTTCACAGGAAATTGTGAACCTA
TTGCTTTCTGGGGAAGCAGTTGCCAATGTGTTTGATGGGAGGATGGATTTGGGTGGTGGC
ATGTTTGTGAAGGGTATCTCCACAACGGTGGAAGTTGGGTTTCTTACTCTGCTAGAGTCC
CTAAACTTTTGCAAAGTTGGCCTGCATTTGAAGTGCCCGAAATGGCCAATATGGGTTGTT
GGCAGCGAATCTCATTACACTGTCTTATTTGCTCTTGATACGAAAGTTCAGGAGGAGAAT
GAACTTGAAGGCCGGGAAACAAAGATCCGCAGAGCTTTTGATGCACAAGATCAGAGTGGA
GGTGGTGGATTCATTAGCGTGGAAGGTTTTCATCAAGTCCTTAGGGAGACTAATGTCAGT
CTTCCCGCCGATAAGCTTCAAAACCTCTGCAGCAGTGGATATATTGTATGGAGCGAATTC
TGGCAGGTTCTGTTAGACTTGGACAAGAGTATGGGAGGACTAAAAGATCCTAGTGGATTA
ATGGGGAAAAAGGTCTTTGATCTTTACCACTTCAATGGGATTGCAAAATCGGTTATGAAT
GGGAACCAGGTTTCATCTGTAAATGATTTTCCAGTACAAAGGCCTAGACTCACTAAGTTG
AGGGTTTCAGTTCCCCCAAGGTGGACGCCGGAGGAGTTCATGTCTTCAGGCCCTGGTACA
AGTGATCCTACTGCAGGTAAGGATTCTGTTACTGAAGTTTCAAAACCGGAACCTTCTCAG
CATGCTCCTTTGGTTGACTGTATCCGGACACGCTGGTCCCGAGCCACATGTACTTGGGAA
GGTGATGCACCAAGCATAGTTTGA

Peptide Sequence

PEP ID

XP_016498955.1
PEP Infomation

PREDICTED: protein FAM188A-like [Nicotiana tabacum]
Sequence

MADQEDEELKMALRMSMQKESPEPKRSKPGEEVVGAVGEEGESPEVKNRRLQRELMAAAA
EKRMIVAAKNVAEPLAEKSGRSGSGVVECKDKSVNLVKDEDKNVNLVKGEEKIVNLGEEL
SVAEANELFSMIFGCEVTRDILGQWTNQGIRFSPDPDTSMGLVQHEGGPCGVLAAIQAFV
LKYLLFFPEELNIVSPSLSANVGLRRLADKESAGADIFSSLSEEKKSRALVRGMGEILFM
CGSNRRVVIASLRILDGNLEESEGRSSDEVISKALEGLSLESGANLQKVLIINTYTSSID
ALQRLEALLPVFRSRMGAMLFLISALLSRGMDSVQADRDDPSQPLVTAPFGHASQEIVNL
LLSGEAVANVFDGRMDLGGGMFVKGISTTVEVGFLTLLESLNFCKVGLHLKCPKWPIWVV
GSESHYTVLFALDTKVQEENELEGRETKIRRAFDAQDQSGGGGFISVEGFHQVLRETNVS
LPADKLQNLCSSGYIVWSEFWQVLLDLDKSMGGLKDPSGLMGKKVFDLYHFNGIAKSVMN
GNQVSSVNDFPVQRPRLTKLRVSVPPRWTPEEFMSSGPGTSDPTAGKDSVTEVSKPEPSQ
HAPLVDCIRTRWSRATCTWEGDAPSIV

Transcript Sequence

Gene sequence data has not been registered.